| # | Title | Western Title | Writer | Broadcast Date (Japan) |
| 1 | The Road to Earth | More Than Meets The Eye, Part 1 | George Arthur Bloom | 06/07/1985 |
| 2 | Secret of the Ruby Crystals | More Than Meets The Eye, Part 2 | George Arthur Bloom | 13/07/1985 |
| 3 | Escape from Earth! | More Than Meets The Eye, Part 3 | George Arthur Bloom | 20/07/1985 |
| 4 | Operation: Space Bridge | Transport To Oblivion | Dick Robbins, Bryce Malek | 27/07/1985 |
| 5 | The Return of Megatron | Roll For It | George Arthur Bloom | 03/08/1985 |
| 6 | S.O.S. Cybertrons! | Divide And Conquer | Donald F. Glut | 10/08/1985 |
| 7 | Birth of the Dinobots | S.O.S. Dinobots | Donald F. Glut | 17/08/1985 |
| 8 | The Mysterious Giant Meteorite | War Of The Dinobots | Douglas Booth & Larry Strauss | 24/08/1985 |
| 9 | Operation: Obliterate Earth | Countdown to Extinction | Reed Robbins & Peter Salas | 31/08/1985 |
| 10 | The Laws of Seibertron | Heavy Metal War | Donald F. Glut | 07/09/1985 |
| 11 | Frankenstein Spike | Autobot Spike | Donald F. Glut | 14/09/1985 |
| 12 | Steal the Solar Energy! | Changing Gears | Larry Parr | 21/09/1985 |
| 13 | Ligier's Betrayal | Traitor | George Hampton & Mike Moore | 28/09/1985 |
| 14 | Birth of the Transformers! | - | Clip Show (Japan Only) | 05/10/1985 |
| 15 | Immobilizer | The Immobilizer | Earl Kress | 18/10/1985 |
| 16 | Atlantis, Arise! | Atlantis, Arise! | Douglas Booth | 25/10/1985 |
| 17 | Shadow of The Nightbird | Enter The Nightbird | Sylvia Wilson & Richard Milton | 01/11/1985 |
| 18 | Dinobot Showdown!, Part 1 | Dinobot Island, Part 1 | Donald F. Glut | 08/11/1985 |
| 19 | Dinobot Showdown!, Part 2 | Dinobot Island, Part 1 | Donald F. Glut | 15/11/1985 |
| 20 | Master Builders | The Master Builders | David N. Gottlieb & Herb Engelhardt | 22/11/1985 |
| 21 | Insectron Syndrome | The Insecticon Syndrome | Douglas Booth | 29/11/1985 |
| 22 | Two Convoys | A Prime Problem | Dick Robbins & Bryce Malek | 06/12/1985 |
| 23 | Steel City | City Of Steel | Douglas Booth | 13/12/1985 |
| 24 | Capture the Negavator | Auto Berserk | Antoni Zalewski | 20/12/1985 |
| 25 | The Micro Suicide Squad | Microbots | David Wise | 27/12/1985 |
| 26 | Megatron's Plan to Rule Earth, Part 1 | Megatron's Master Plan, Part 1 | Donald F. Glut | 10/01/1986 |
| 27 | Megatron's Plan to Rule Earth, Part 2 | Megatron's Master Plan, Part 2 | Donald F. Glut | 17/01/1986 |
| 28 | Desertion of the Dinobots, Part 1 | Desertion of the Dinobots, Part 1 | Earl Kress | 24/01/1986 |
| 29 | Desertion of the Dinobots, Part 2 | Desertion of the Dinobots, Part 2 | Earl Kress | 31/01/1986 |
| 30 | Time Travellers | A Decepticon Raider In King Arthur's Court | Douglas Booth | 07/02/1986 |
| 31 | Mystery of the Golden Lagoon | The Golden Lagoon | Dennis Marks | Between 7/2/86 & 14/2/86 |
| 32 | Sky Gods | The God Gambit | Buzz Dixon | 14/02/1986 |
| 33 | Tracks the Warrior | Make Tracks | David Wise | 21/02/1986 |
| 34 | Operation: Survival | Quest for Survival | Reed Robbins & Peter Salas | 28/02/1986 |
| 35 | The Secret of Omega Supreme | The Secret of Omega Supreme | David Wise | 07/03/1986 |
| 36 | Monacus, the Gambling World | The Gambler | Michael Charles Hill | 14/03/1986 |
| 37 | From a Young Woman, with Love | The Girl Who Loved Powerglide | David Wise | 21/03/1986 |
| 38 | Panic the Kremzeek! | Kremzeek! | David Wise | 28/03/1986 |
| 39 | Revolt of the Triple Changers | Triple Takeover | Larry Strauss | 11/04/1986 |
| 40 | Children Play | Child's Play | Beth Bornstein | 18/04/1986 |
| 41 | Search for Alpha Trion | The Search for Alpha Trion | Beth Bornstein | 25/04/1986 |
| 42 | The Key to Vector Sigma, Part 1 | The Key to Vector Sigma, Part 1 | Douglas Booth | 02/05/1986 |
| 43 | The Key to Vector Sigma, Part 2 | The Key to Vector Sigma, Part 2 | Douglas Booth | 09/05/1986 |
| 44 | The Lake of Transformation | Sea Change | Douglas Booth | 16/05/1986 |
| 45 | Hoist Goes Hollywood | Hoist Goes Hollywood | Earl Kress | 23/05/1986 |
| 46 | Charge, Airbots | Aerial Assault | Douglas Booth | 30/05/1986 |
| 47 | The Trans-Europe Express | Trans-Europe Express | David Wise | 06/06/1986 |
| 48 | The Terrifying Cosmic Rust! | Cosmic Rust | Paul Davids | 13/06/1986 |
| 49 | Defeat Devastar! | The Core | Dennis Marks | 20/06/1986 |
| 50 | Broadcast Blues | Blaster Blues | Larry Strauss | 27/06/1986 |
| 51 | The Target is Convoy | Prime Target | Flint Dille & Buzz Dixon | 04/07/1986 |
| 52 | Broadcast VS Soundwave | Auto-Bop | David Wise | 11/07/1986 |
| 53 | Starscream's Army | Starscream's Brigade | Michael C. Hill | 18/07/1986 |
| 54 | The Attack of Bruticus | The Revenge of Bruticus | Larry Strauss | 25/07/1986 |
| 55 | The Endless War | - | Clip Show (Japan Only) | 01/08/1986 |
| 56 | Mortal Combat on Dinobot Island | - | Clip Show (Japan Only) | 08/08/1986 |
| 57 | The Giant Warrior Devastar | - | Clip Show (Japan Only) | 15/08/1986 |
| 58 | Unending Desperate Fighting | - | Clip Show (Japan Only) | 29/08/1986 |
| 59 | The Resurrection of Bruticus | B.O.T. | Earl Kress | 05/09/1986 |
| 60 | Caused War | War Dawn | David Wise | 12/09/1986 |
| 61 | Perfect Disguise | Masquerade | Donald F. Glut | 19/09/1986 |
| 62 | Skyfire's Resurrection | Fire In The Sky | Douglas Booth & Leo D. Paur | 26/09/1986 |
| 63 | Secret of the Incas | Fire On The Mountain | Douglas Booth | 03/10/1986 |
| 64 | The Mystery of the Insectrons | Plague of Insecticons | Donald F. Glut | 24/10/1986 |
| 65 | Stop the Transforming! | The Autobot Run | Donald F. Glut | 31/10/1986 |
| 66 | Day of Destruction, Part 1 | The Ultimate Doom: Brainwash, Part 1 | Douglas Booth & Larry Strauss | 07/11/1986 |
| 67 | Day of Destruction, Part 2 | The Ultimate Doom: Search, Part 2 | Douglas Booth & Earl Kress | 07/11/1986 |
| 68 | Day of Destruction, Part 2 | The Ultimate Doom: Revival, Part 3 | Douglas Booth & Leo D. Paur | 07/11/1986 |
| 69 | Earth's Greatest Crisis | - | Clip Show (Japan Only) | - |
| 70 | Seek the Seibertonium | - | Clip Show (Japan Only) | - |
| 71 | The Stuntrons vs. the Airbots | - | Clip Show (Japan Only) | - |
| 72 | Mutiny of the Combatrons | - | Clip Show (Japan Only) | - |
| Misc (Released on Laserdisc & DVD Only) | ||||
| - | The Cybertron Insurrection | Attack of the Autobots | David Wise | N/A |
| - | The Computer Rebellion | Day Of The Machines | David Wise | N/A |
