| # | Title | Writer | Original Broadcast Date (US) |
| Season 1 | |||
| 1 | More Than Meets The Eye Part 1 | George Arthur Bloom | 20/08/1993 |
| 2 | More Than Meets The Eye Part 2 | George Arthur Bloom | 27/08/1993 |
| 3 | More Than Meets The Eye Part 3 | George Arthur Bloom | 03/09/1993 |
| 4 | S.O.S. Dinobots | Donald F. Glut | 11/06/1993 |
| 5 | Heavy Metal War | Donald F. Glut | 18/06/1993 |
| 6 | The Autobot Run | Donald F. Glut | 25/06/1993 |
| 7 | The Core | Dennis Marks | 02/07/1993 |
| 8 | Dinobot Island Part 1 | Donald F. Glut | 09/07/1993 |
| 9 | Dinobot Island Part 2 | Donald F. Glut | 16/07/1993 |
| 10 | The Master Builders | David N. Gottlieb & Herb Engelhardt | 23/07/1993 |
| 11 | A Decepticon Raider In King Arthur's Court | Douglas Booth | 30/07/1993 |
| 12 | The Golden Lagoon | Dennis Marks | 06/08/1993 |
| 13 | Prime Target | Flint Dille & Buzz Dixon | 13/08/1993 |
| Season 2 | |||
| 14 | War Of The Dinobots | Douglas Booth & Larry Strauss | 12/09/1993 |
| 15 | Atlantis, Arise ! | Douglas Booth | 13/09/1993 |
| 16 | Auto Berserk | Antoni Zalewski | 14/09/1993 |
| 17 | Kremzeek! | David Wise | 15/09/1993 |
| 18 | Triple Takeover | Larry Strauss | 16/09/1993 |
| 19 | Starscream's Brigade | Michael C. Hill | 19/09/1993 |
| 20 | The Revenge of Bruticus | Larry Strauss | 20/09/1993 |
| 21 | Masquerade | Donald F. Glut | 21/09/1993 |
| 22 | Ghost In The Machine | Michael Charles Hill & Joey K. Piedra | 22/09/1993 |
| 23 | The Ultimate Weapon | Arthur Byron Cover | 23/09/1993 |
| 24 | Fight or Flee | Tony Cinciripini & Larry Leahn | 26/09/1993 |
| 25 | Transport To Oblivion | Dick Robbins, Bryce Malek | 28/09/1993 |
| 26 | Roll For It | George Arthur Bloom | 30/09/1993 |
| 27 | Changing Gears | Larry Parr | 04/10/1993 |
| 28 | Attack of the Autobots | David Wise | 07/10/1993 |
| 29 | Day Of The Machines | David Wise | 10/10/1993 |
| 30 | Enter The Nightbird | Sylvia Wilson & Richard Milton | 12/10/1993 |
| 31 | A Prime Problem | Dick Robbins & Bryce Malek | 14/10/1993 |
| 32 | The Insecticon Syndrome | Douglas Booth | 17/10/1993 |
| 33 | Blaster Blues | Larry Strauss | 21/10/1993 |
| 34 | Microbots | David Wise | 20/10/1993 |
| 35 | Sea Change | Douglas Booth | 27/10/1993 |
| 36 | The Search for Alpha Trion | Beth Bornstein | 28/10/1993 |
| 37 | Autobot Spike | Donald F. Glut | 01/11/1993 |
| 38 | The Girl Who Loved Powerglide | David Wise | 02/11/1993 |
| 39 | Desertion of the Dinobots, Part 1 | Earl Kress | 03/11/1993 |
| 40 | Desertion of the Dinobots, Part 2 | Earl Kress | 04/11/1993 |
| 41 | The Ultimate Doom: Brainwash Part 1 | Douglas Booth & Larry Strauss | 07/11/1993 |
| 42 | The Ultimate Doom: Search Part 2 | Douglas Booth & Earl Kress | 08/11/1993 |
| 43 | The Ultimate Doom: Revival Part 3 | Douglas Booth & Leo D. Paur | 09/11/1993 |
| 44 | B.O.T. | Earl Kress | 10/11/1993 |
| 45 | Aerial Assault | Douglas Booth | 11/11/1993 |
| 46 | Cosmic Rust | Paul Davids | 14/11/1993 |
| 47 | Megatron's Master Plan, Part 1 | Donald F. Glut | 15/11/1993 |
| 48 | Megatron's Master Plan, Part 2 | Donald F. Glut | 16/11/1993 |
| 49 | Fire On The Mountain | Douglas Booth | 28/11/1993 |
| 50 | Countdown to Extinction | Reed Robbins & Peter Salas | 29/11/1993 |
| 51 | Trans-Europe Express | David Wise | 21/11/1993 |
| 52 | City Of Steel | Douglas Booth | 22/11/1993 |
